Variant report

Variant	rs9314133
Chromosome Location	chr5:94526400-94526401
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94524628..94527831-chr5:94529365..94532279,3	K562	blood:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10044143	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10050382	0.83[ASN][1000 genomes]
rs10057040	0.82[ASN][1000 genomes]
rs10060946	0.82[ASN][1000 genomes]
rs10064420	0.82[ASN][1000 genomes]
rs10066492	0.82[ASN][1000 genomes]
rs10068165	0.82[ASN][1000 genomes]
rs10068954	0.82[ASN][1000 genomes]
rs10069998	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10072003	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10073182	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10073184	0.82[ASN][1000 genomes]
rs10073604	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10075123	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10077145	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10079049	0.87[ASN][1000 genomes]
rs10515223	0.82[ASN][1000 genomes]
rs13163584	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs154062	0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs154063	0.83[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs154064	0.82[ASN][1000 genomes]
rs17349336	0.82[ASN][1000 genomes]
rs3104738	0.82[ASN][1000 genomes]
rs35698400	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs36100739	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs443272	0.80[MEX][hapmap]
rs458978	0.88[CEU][hapmap]
rs459730	0.88[CEU][hapmap]
rs461059	0.88[CEU][hapmap]
rs462526	0.80[CEU][hapmap]
rs463261	0.81[CEU][hapmap]
rs463587	0.83[CEU][hapmap];0.82[GIH][hapmap];0.80[MEX][hapmap];0.85[TSI][hapmap]
rs463961	0.81[CEU][hapmap]
rs464001	0.85[CEU][hapmap]
rs464242	0.82[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap]
rs464971	0.82[CEU][hapmap]
rs465847	0.83[CEU][hapmap]
rs466024	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs56244253	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs686420	0.83[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap]
rs71630703	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs71630704	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71630705	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71630706	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7349800	0.87[ASN][1000 genomes]
rs73776337	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94526200-94526400	Enhancers	Fetal Brain Female	brain

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