Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs154062	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs154063	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs26393	0.87[CEU][hapmap]
rs26394	0.87[CEU][hapmap]
rs26395	0.88[CEU][hapmap]
rs27688	0.93[CEU][hapmap]
rs27767	0.93[CEU][hapmap]
rs27768	0.90[CEU][hapmap]
rs33811	0.87[CEU][hapmap]
rs397826	0.92[CEU][hapmap]
rs443272	0.88[CEU][hapmap]
rs448433	0.93[CEU][hapmap]
rs457568	0.92[CEU][hapmap]
rs458663	0.93[CEU][hapmap]
rs458978	1.00[CEU][hapmap]
rs459730	1.00[CEU][hapmap]
rs460102	0.93[CEU][hapmap]
rs460363	0.93[CEU][hapmap]
rs461059	1.00[CEU][hapmap]
rs462526	0.93[CEU][hapmap]
rs462862	0.93[CEU][hapmap]
rs463261	0.93[CEU][hapmap]
rs463587	1.00[CEU][hapmap]
rs463961	0.93[CEU][hapmap]
rs464001	1.00[CEU][hapmap]
rs464158	0.93[CEU][hapmap]
rs464242	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs464971	0.93[CEU][hapmap]
rs465847	0.87[CEU][hapmap]
rs466024	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs467144	0.93[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94593400-94593600	Enhancers	HUVEC	blood vessel

Quick Search: