Variant report

Variant	rs7204285
Chromosome Location	chr16:69671455-69671456
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:69665807..69668565-chr16:69668907..69671600,2	K562	blood:
2	chr16:69665807..69668565-chr16:69668796..69671600,3	K562	blood:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs11859488	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11860750	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11861496	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11861500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11862202	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11863013	0.95[AFR][1000 genomes]
rs11864406	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11864525	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11865019	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11866304	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13330277	0.89[AFR][1000 genomes]
rs16958889	1.00[AMR][1000 genomes]
rs16958892	1.00[AMR][1000 genomes]
rs28525492	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61730073	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6499233	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6499235	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6499236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6499242	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6499245	0.91[AFR][1000 genomes]
rs689459	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7185263	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7185430	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7186199	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7187272	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7188149	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7190711	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7195974	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7196193	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7199248	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7204339	1.00[AMR][1000 genomes]
rs74025775	1.00[AMR][1000 genomes]
rs8047310	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8049055	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8052967	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8053497	1.00[AMR][1000 genomes]
rs8054678	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8056135	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8058514	0.89[AFR][1000 genomes]
rs8058669	1.00[AMR][1000 genomes]
rs8059310	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8059311	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8059804	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8060543	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8063483	1.00[AMR][1000 genomes]
rs9746717	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9921129	0.92[AFR][1000 genomes]

No data

Chromatin state (count:115 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:69645800-69681000	Weak transcription	Fetal Brain Female	brain
2	chr16:69647600-69705000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
3	chr16:69653600-69680800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr16:69653600-69689600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr16:69654200-69703600	Weak transcription	Brain Angular Gyrus	brain
6	chr16:69654200-69705600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr16:69654600-69705000	Weak transcription	Psoas Muscle	Psoas
8	chr16:69660200-69671800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr16:69660400-69709600	Weak transcription	Fetal Brain Male	brain
10	chr16:69660600-69672200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr16:69667000-69727600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr16:69667600-69681000	Weak transcription	Rectal Smooth Muscle	rectum
13	chr16:69667800-69672000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr16:69667800-69680800	Weak transcription	Colon Smooth Muscle	Colon
15	chr16:69668400-69671600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr16:69668400-69672200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr16:69668600-69671800	ZNF genes & repeats	GM12878-XiMat	blood
18	chr16:69668800-69671600	Strong transcription	Duodenum Mucosa	Duodenum
19	chr16:69669000-69671600	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr16:69669000-69671800	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr16:69669000-69671800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
22	chr16:69669000-69672000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr16:69669000-69673800	Weak transcription	NHDF-Ad	bronchial
24	chr16:69669200-69671600	Strong transcription	Primary T helper cells fromperipheralblood	blood
25	chr16:69669200-69671600	Strong transcription	Fetal Lung	lung
26	chr16:69669200-69671600	Strong transcription	Fetal Muscle Trunk	muscle
27	chr16:69669200-69672000	ZNF genes & repeats	A549	lung
28	chr16:69669400-69671600	Strong transcription	Rectal Mucosa Donor 29	rectum
29	chr16:69669400-69671800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr16:69669400-69671800	Strong transcription	Primary T cells from cord blood	blood
31	chr16:69669400-69671800	Strong transcription	Primary T cells fromperipheralblood	blood
32	chr16:69669400-69672000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
33	chr16:69669400-69672200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr16:69669400-69672400	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr16:69669600-69671600	Strong transcription	Placenta Amnion	Placenta Amnion
36	chr16:69669600-69671800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
37	chr16:69669800-69671800	Strong transcription	Rectal Mucosa Donor 31	rectum
38	chr16:69669800-69672000	ZNF genes & repeats	Primary B cells from cord blood	blood
39	chr16:69669800-69672200	ZNF genes & repeats	Fetal Intestine Small	intestine
40	chr16:69669800-69672200	Strong transcription	HSMMtube	muscle
41	chr16:69670000-69671600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr16:69670000-69671600	ZNF genes & repeats	HMEC	breast
43	chr16:69670000-69671800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
44	chr16:69670000-69671800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
45	chr16:69670000-69671800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
46	chr16:69670000-69671800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
47	chr16:69670000-69672000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr16:69670000-69672200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr16:69670000-69672200	Strong transcription	Left Ventricle	heart
50	chr16:69670200-69671800	ZNF genes & repeats	HepG2	liver

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