Variant report

Variant	rs7246523
Chromosome Location	chr19:44780268-44780269
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10403199	1.00[EUR][1000 genomes]
rs10404742	1.00[EUR][1000 genomes]
rs10408954	1.00[EUR][1000 genomes]
rs10411672	1.00[EUR][1000 genomes]
rs10418545	1.00[EUR][1000 genomes]
rs10420704	1.00[EUR][1000 genomes]
rs10423950	1.00[EUR][1000 genomes]
rs16978899	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35932898	1.00[EUR][1000 genomes]
rs4449053	1.00[EUR][1000 genomes]
rs58005257	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7259775	1.00[EUR][1000 genomes]
rs73553262	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553269	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73553273	1.00[EUR][1000 genomes]
rs73553283	1.00[EUR][1000 genomes]
rs73553293	1.00[EUR][1000 genomes]
rs73553294	1.00[EUR][1000 genomes]
rs73555129	1.00[EUR][1000 genomes]
rs73555130	1.00[EUR][1000 genomes]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44764800-44782000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr19:44770000-44780800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr19:44775000-44791200	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr19:44776800-44784000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
5	chr19:44777000-44781000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr19:44777000-44807000	ZNF genes & repeats	Liver	Liver
7	chr19:44777200-44780800	ZNF genes & repeats	Adipose Nuclei	Adipose
8	chr19:44777400-44780600	ZNF genes & repeats	Rectal Mucosa Donor 31	rectum
9	chr19:44777400-44782400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
10	chr19:44778000-44780800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr19:44778600-44787000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr19:44778800-44780400	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr19:44778800-44780400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr19:44778800-44780600	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr19:44778800-44780800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr19:44778800-44781600	Weak transcription	Left Ventricle	heart
17	chr19:44778800-44783200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr19:44778800-44784800	Weak transcription	Right Ventricle	heart
19	chr19:44778800-44791000	Weak transcription	Fetal Heart	heart
20	chr19:44778800-44791000	Weak transcription	HSMMtube	muscle
21	chr19:44778800-44791400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr19:44779000-44783200	Weak transcription	Fetal Lung	lung
23	chr19:44779200-44781400	Weak transcription	Placenta	Placenta
24	chr19:44779200-44783400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
25	chr19:44779200-44789200	Weak transcription	Brain Angular Gyrus	brain
26	chr19:44779400-44791000	Weak transcription	Dnd41	blood
27	chr19:44780000-44780800	ZNF genes & repeats	Ovary	ovary
28	chr19:44780000-44781400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr19:44780000-44781600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr19:44780000-44782200	Weak transcription	Psoas Muscle	Psoas
31	chr19:44780200-44780600	ZNF genes & repeats	Aorta	Aorta
32	chr19:44780200-44780600	ZNF genes & repeats	Fetal Stomach	stomach
33	chr19:44780200-44780600	ZNF genes & repeats	Lung	lung

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