Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:39463902..39468166-chr19:39481620..39485046,3	MCF-7	breast:
2	chr19:39478331..39480125-chr19:39483725..39485536,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000269190	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10410965	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs1268240	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs1268251	0.83[ASN][1000 genomes]
rs2318896	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs472104	0.90[CHB][hapmap]
rs473729	0.83[ASN][1000 genomes]
rs473878	0.90[CHB][hapmap]
rs479001	0.83[ASN][1000 genomes]
rs485226	0.84[ASN][1000 genomes]
rs497378	0.91[CHB][hapmap]
rs533573	1.00[CHB][hapmap];0.91[JPT][hapmap];0.83[ASN][1000 genomes]
rs536244	1.00[CHB][hapmap];0.91[JPT][hapmap];0.83[ASN][1000 genomes]
rs580494	0.84[ASN][1000 genomes]
rs601966	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs607292	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs631952	0.83[ASN][1000 genomes]
rs646580	0.84[ASN][1000 genomes]
rs7258182	1.00[CHB][hapmap];0.83[JPT][hapmap]
rs7258469	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73047946	0.92[ASN][1000 genomes]
rs73541562	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8109914	1.00[CHB][hapmap];0.82[JPT][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39480000-39503400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:39480200-39486600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr19:39481000-39516000	Weak transcription	Brain Angular Gyrus	brain
4	chr19:39484200-39486600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr19:39484400-39486800	Weak transcription	GM12878-XiMat	blood
6	chr19:39484800-39485400	Weak transcription	HUVEC	blood vessel

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