Variant report

Variant	rs73047946
Chromosome Location	chr19:39486125-39486126
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10410965	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11666514	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12150941	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1268251	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12978285	0.80[ASN][1000 genomes]
rs2081994	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2081995	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2318895	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2318896	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2873835	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4305198	0.83[EUR][1000 genomes]
rs473729	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs479001	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4802012	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4803179	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4803180	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4803184	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs485226	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs533573	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs536244	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs580494	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs601966	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs603268	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs607292	0.84[ASN][1000 genomes]
rs631952	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs646580	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs650450	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7247817	0.92[ASN][1000 genomes]
rs7258182	0.81[ASN][1000 genomes]
rs7258469	0.84[ASN][1000 genomes]
rs73541562	0.84[ASN][1000 genomes]
rs8105050	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8109914	0.81[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39480000-39503400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:39480200-39486600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr19:39481000-39516000	Weak transcription	Brain Angular Gyrus	brain
4	chr19:39484200-39486600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr19:39484400-39486800	Weak transcription	GM12878-XiMat	blood
6	chr19:39485200-39486200	Enhancers	Placenta	Placenta
7	chr19:39485400-39487000	Enhancers	HepG2	liver
8	chr19:39485400-39487600	Enhancers	HUVEC	blood vessel
9	chr19:39485800-39486800	Weak transcription	Lung	lung
10	chr19:39486000-39487000	Enhancers	Fetal Intestine Small	intestine

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