Variant report

Variant	rs72632710
Chromosome Location	chr13:86416254-86416255
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs55800255	0.89[EUR][1000 genomes]
rs55872307	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55887208	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56229215	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72631094	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72632708	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72632713	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72632715	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72632717	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72632726	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72632729	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72632734	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs8002082	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9547369	0.86[AMR][1000 genomes]
rs9547372	0.86[AMR][1000 genomes]
rs9547374	0.86[AMR][1000 genomes]
rs9602858	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900734	chr13:86415632-86911159	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:86415200-86423800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links