Variant report

Variant	rs72653739
Chromosome Location	chr6:15970690-15970691
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10949323	0.92[EUR][1000 genomes]
rs17770107	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4716020	0.88[ASN][1000 genomes]
rs67091502	0.91[ASN][1000 genomes]
rs9349991	1.00[ASN][1000 genomes]
rs9367887	0.87[ASN][1000 genomes]
rs9370849	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9370851	1.00[ASN][1000 genomes]
rs9370852	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9370853	0.87[ASN][1000 genomes]
rs9383096	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9383097	0.94[ASN][1000 genomes]
rs9396621	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9396622	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9396623	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9396626	0.87[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15966000-15971200	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr6:15968400-15970800	Enhancers	Placenta	Placenta
3	chr6:15968400-15971000	Enhancers	HMEC	breast
4	chr6:15968600-15971000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:15968600-15971000	Enhancers	K562	blood
6	chr6:15969800-15970800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:15970000-15971000	Enhancers	Fetal Intestine Small	intestine
8	chr6:15970200-15971000	Enhancers	Fetal Intestine Large	intestine
9	chr6:15970600-15980800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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