The 2.0 version of rSNPBase

Variant report

Variant rs72667875
Chromosome Location chr1:56043801-56043802
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56037200-56047200 Weak transcription Esophagus oesophagus
2 chr1:56039000-56045200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:56039000-56045800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:56039000-56046000 Weak transcription NHLF lung
5 chr1:56039000-56046800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr1:56039200-56045800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:56039200-56047200 Weak transcription Psoas Muscle Psoas
8 chr1:56039400-56045000 Weak transcription HSMMtube muscle
9 chr1:56039600-56046200 Weak transcription NH-A brain
10 chr1:56040600-56058600 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr1:56041600-56044400 Weak transcription Muscle Satellite Cultured Cells --
12 chr1:56041800-56045000 Weak transcription Osteobl bone
13 chr1:56041800-56045200 Weak transcription NHDF-Ad bronchial
14 chr1:56042000-56044000 Weak transcription Fetal Lung lung
15 chr1:56042000-56044600 Weak transcription HSMM muscle
16 chr1:56042000-56045000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:56042000-56046200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:56042000-56046400 Weak transcription Colon Smooth Muscle Colon
19 chr1:56042000-56046600 Weak transcription Brain Anterior Caudate brain
20 chr1:56042000-56047400 Weak transcription Placenta Amnion Placenta Amnion
21 chr1:56042200-56044600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:56042200-56044600 Weak transcription Left Ventricle heart
23 chr1:56042200-56044600 Weak transcription Lung lung
24 chr1:56042200-56045000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:56042200-56046200 Weak transcription Brain Cingulate Gyrus brain
26 chr1:56042200-56046200 Weak transcription Brain Substantia Nigra brain
27 chr1:56042200-56046400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:56042200-56046400 Weak transcription Brain Angular Gyrus brain
29 chr1:56042200-56046400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:56042200-56046600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:56042200-56046600 Weak transcription Brain Hippocampus Middle brain
32 chr1:56042200-56049600 Weak transcription Fetal Muscle Leg muscle
33 chr1:56042200-56052400 Weak transcription Right Atrium heart
34 chr1:56042800-56046400 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr1:56042800-56046400 Enhancers HMEC breast
36 chr1:56043000-56049600 Weak transcription Brain Germinal Matrix brain
37 chr1:56043000-56049800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr1:56043000-56050200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr1:56043000-56050400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:56043400-56046400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:56043600-56044800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:56043600-56045000 Enhancers Fetal Stomach stomach
43 chr1:56043800-56045000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015