Variant report

Variant	rs72681525
Chromosome Location	chr14:78862593-78862594
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11159355	0.84[EUR][1000 genomes]
rs11159356	0.83[ASN][1000 genomes]
rs11622679	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12432856	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12589172	0.94[EUR][1000 genomes]
rs12883984	0.85[ASN][1000 genomes]
rs17755949	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17829186	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4899711	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4903752	0.97[EUR][1000 genomes]
rs60110504	0.82[ASN][1000 genomes]
rs7144816	0.83[AMR][1000 genomes]
rs72681530	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72681541	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs8020842	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832837	chr14:78766805-78946526	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78860600-78864600	Weak transcription	Brain Germinal Matrix	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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