Variant report

Variant rs72727206
Chromosome Location chr15:49405159-49405160
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49388800-49418800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr15:49388800-49434800 Weak transcription Small Intestine intestine
3 chr15:49393600-49413200 Weak transcription HMEC breast
4 chr15:49395400-49419000 Weak transcription Fetal Kidney kidney
5 chr15:49395600-49426400 Weak transcription Rectal Smooth Muscle rectum
6 chr15:49396000-49419600 Weak transcription NHEK skin
7 chr15:49396400-49418800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr15:49398600-49427600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr15:49399200-49414600 Weak transcription HUVEC blood vessel
10 chr15:49402400-49406000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr15:49402600-49405600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr15:49402800-49406200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr15:49402800-49406200 Strong transcription Muscle Satellite Cultured Cells --
14 chr15:49402800-49407600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr15:49403000-49405200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr15:49403000-49417200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr15:49403000-49434600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr15:49403200-49405200 ZNF genes & repeats Primary hematopoietic stem cells blood
19 chr15:49403200-49408200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr15:49403200-49413000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr15:49403200-49423400 Weak transcription Psoas Muscle Psoas
22 chr15:49403400-49405600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
23 chr15:49403400-49405600 ZNF genes & repeats Fetal Intestine Large intestine
24 chr15:49403400-49406200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr15:49403400-49406400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr15:49403400-49419600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr15:49403400-49440200 Weak transcription Pancreas Pancrea
28 chr15:49403600-49405400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
29 chr15:49403600-49405400 Weak transcription Lung lung
30 chr15:49403600-49405600 Strong transcription Primary monocytes fromperipheralblood blood
31 chr15:49403600-49405600 Strong transcription NH-A brain
32 chr15:49403600-49406200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr15:49403600-49411200 Weak transcription Fetal Intestine Small intestine
34 chr15:49403600-49423600 Weak transcription Esophagus oesophagus
35 chr15:49403600-49432200 Weak transcription Fetal Stomach stomach
36 chr15:49403600-49435200 Weak transcription Aorta Aorta
37 chr15:49403600-49435200 Weak transcription Gastric stomach
38 chr15:49403600-49435400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr15:49403800-49405600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr15:49403800-49405600 ZNF genes & repeats Primary B cells from peripheral blood blood
41 chr15:49403800-49417400 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr15:49403800-49419400 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr15:49403800-49433200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr15:49404000-49405600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
45 chr15:49404000-49405800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
46 chr15:49404000-49406200 ZNF genes & repeats GM12878-XiMat blood
47 chr15:49404000-49419800 Weak transcription NHLF lung
48 chr15:49404200-49405400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
49 chr15:49404200-49405400 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
50 chr15:49404200-49405600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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