Variant report

Variant	rs72729553
Chromosome Location	chr14:69079412-69079413
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69078810..69080489-chr14:69081085..69082611,2	MCF-7	breast:
2	chr14:68863006..68865932-chr14:69077018..69079780,3	MCF-7	breast:

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs17106005	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17106008	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17106011	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17106012	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17756585	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17756627	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17834971	0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2273485	0.81[ASN][1000 genomes]
rs4902615	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4902619	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55990521	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56104115	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs58015193	0.80[ASN][1000 genomes]
rs7153168	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7153395	0.91[ASN][1000 genomes]
rs72729557	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69069600-69080000	Enhancers	Fetal Muscle Leg	muscle
2	chr14:69072400-69079800	Enhancers	Fetal Stomach	stomach
3	chr14:69073400-69079800	Enhancers	Stomach Mucosa	stomach
4	chr14:69075200-69081200	Weak transcription	Fetal Brain Male	brain
5	chr14:69075600-69080600	Weak transcription	Thymus	Thymus
6	chr14:69076000-69080600	Weak transcription	Primary B cells from peripheral blood	blood
7	chr14:69076800-69079800	Enhancers	Fetal Intestine Small	intestine
8	chr14:69077000-69079800	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr14:69077000-69079800	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr14:69077200-69079800	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr14:69077200-69079800	Enhancers	Gastric	stomach
12	chr14:69077200-69080000	Enhancers	Left Ventricle	heart
13	chr14:69077400-69079800	Enhancers	HSMM	muscle
14	chr14:69077800-69079600	Enhancers	Skeletal Muscle Male	skeletal muscle
15	chr14:69077800-69079800	Enhancers	Muscle Satellite Cultured Cells	--
16	chr14:69077800-69079800	Enhancers	Fetal Lung	lung
17	chr14:69077800-69079800	Enhancers	Right Ventricle	heart
18	chr14:69078000-69079800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr14:69078000-69080600	Enhancers	Primary neutrophils fromperipheralblood	blood
20	chr14:69078200-69079800	Enhancers	Duodenum Mucosa	Duodenum
21	chr14:69078200-69079800	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr14:69078200-69079800	Enhancers	HepG2	liver
23	chr14:69078800-69080000	Weak transcription	Colon Smooth Muscle	Colon
24	chr14:69079200-69079800	Enhancers	K562	blood
25	chr14:69079200-69080400	Weak transcription	Liver	Liver
26	chr14:69079200-69081000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr14:69079200-69085400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr14:69079400-69079600	Enhancers	HSMMtube	muscle
29	chr14:69079400-69079800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr14:69079400-69083200	Weak transcription	Fetal Heart	heart

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