The 2.0 version of rSNPBase

Variant report

Variant rs72771303
Chromosome Location chr2:11479984-11479985
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11467000-11480200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:11467400-11481200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr2:11467600-11481600 Weak transcription Primary hematopoietic stem cells blood
4 chr2:11467800-11480200 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr2:11468400-11481200 Weak transcription HUVEC blood vessel
6 chr2:11470400-11481400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:11470800-11481200 Weak transcription Right Atrium heart
8 chr2:11470800-11481800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr2:11471000-11481200 Weak transcription HSMM muscle
10 chr2:11471200-11480400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr2:11472200-11482800 Weak transcription Gastric stomach
12 chr2:11474200-11480000 Weak transcription Adipose Nuclei Adipose
13 chr2:11475000-11481200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr2:11475400-11481000 Weak transcription Ovary ovary
15 chr2:11475800-11481200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr2:11476000-11480000 Weak transcription NHDF-Ad bronchial
17 chr2:11476000-11480200 Weak transcription Muscle Satellite Cultured Cells --
18 chr2:11476200-11482200 Weak transcription Primary B cells from peripheral blood blood
19 chr2:11476600-11482200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:11476600-11482800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:11476800-11481000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr2:11476800-11481000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr2:11476800-11481200 Weak transcription Psoas Muscle Psoas
24 chr2:11476800-11482200 Weak transcription Left Ventricle heart
25 chr2:11476800-11482600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:11477000-11480000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr2:11477200-11482200 Weak transcription Fetal Stomach stomach
28 chr2:11477400-11480200 Weak transcription Fetal Intestine Large intestine
29 chr2:11477800-11481000 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr2:11478400-11480400 Weak transcription Fetal Intestine Small intestine
31 chr2:11478600-11480200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:11478800-11480800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr2:11478800-11481000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:11478800-11481200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:11479000-11480600 Flanking Active TSS HepG2 liver
36 chr2:11479000-11481000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr2:11479000-11482600 Weak transcription Right Ventricle heart
38 chr2:11479200-11480200 Enhancers NHLF lung
39 chr2:11479600-11480000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr2:11479600-11480800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr2:11479600-11482000 Enhancers Colon Smooth Muscle Colon
42 chr2:11479800-11480000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
43 chr2:11479800-11480000 Flanking Active TSS Aorta Aorta
44 chr2:11479800-11480000 Flanking Active TSS Hela-S3 cervix
45 chr2:11479800-11480200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
46 chr2:11479800-11480200 Active TSS Skeletal Muscle Female skeletal muscle
47 chr2:11479800-11480200 Enhancers Osteobl bone
48 chr2:11479800-11480400 Active TSS Brain Anterior Caudate brain
49 chr2:11479800-11480600 Enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr2:11479800-11480600 Enhancers Small Intestine intestine

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Last update: Aug 31, 2015