The 2.0 version of rSNPBase

Variant report

Variant rs72816813
Chromosome Location chr10:22865253-22865254
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22822800-22870200 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr10:22825600-22888000 Weak transcription HMEC breast
3 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr10:22844000-22876600 Weak transcription Right Ventricle heart
5 chr10:22844200-22876200 Weak transcription Ovary ovary
6 chr10:22844200-22877200 Weak transcription Colon Smooth Muscle Colon
7 chr10:22844200-22904800 Weak transcription Rectal Smooth Muscle rectum
8 chr10:22849600-22879000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr10:22850000-22869600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr10:22850400-22878800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr10:22850400-22882000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr10:22850400-22882600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr10:22851800-22874800 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr10:22853600-22878600 Weak transcription HUVEC blood vessel
15 chr10:22853800-22876200 Weak transcription Osteobl bone
16 chr10:22854000-22869600 Weak transcription Pancreas Pancrea
17 chr10:22854000-22879000 Weak transcription Muscle Satellite Cultured Cells --
18 chr10:22854200-22866400 Weak transcription Liver Liver
19 chr10:22854200-22887400 Weak transcription NHDF-Ad bronchial
20 chr10:22854200-22887400 Weak transcription NHEK skin
21 chr10:22854600-22867400 Weak transcription Fetal Brain Female brain
22 chr10:22855200-22871000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr10:22855600-22882600 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr10:22855800-22879800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr10:22855800-22881400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr10:22856000-22870000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr10:22856600-22869800 Weak transcription NH-A brain
28 chr10:22856600-22899200 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr10:22856800-22865600 Genic enhancers Primary T cells fromperipheralblood blood
30 chr10:22856800-22888200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr10:22857000-22888200 Weak transcription Small Intestine intestine
32 chr10:22857200-22866200 Weak transcription Gastric stomach
33 chr10:22857200-22879000 Weak transcription H9 Cell Line embryonic stem cell
34 chr10:22857400-22872200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr10:22857600-22865800 Weak transcription Lung lung
36 chr10:22857600-22866200 Weak transcription Duodenum Mucosa Duodenum
37 chr10:22857600-22869600 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr10:22857800-22866000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr10:22858200-22866200 Weak transcription Esophagus oesophagus
40 chr10:22858200-22866400 Weak transcription Aorta Aorta
41 chr10:22858200-22904000 Weak transcription Colonic Mucosa Colon
42 chr10:22858400-22866200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr10:22859000-22871600 Strong transcription K562 blood
44 chr10:22859600-22866200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr10:22859600-22866200 Weak transcription Brain Inferior Temporal Lobe brain
46 chr10:22860000-22866000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr10:22860000-22869600 Weak transcription Psoas Muscle Psoas
48 chr10:22860400-22871000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
49 chr10:22860400-22882200 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr10:22860600-22866200 Weak transcription Brain Cingulate Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015