The 2.0 version of rSNPBase

Variant report

Variant rs72816854
Chromosome Location chr10:22912875-22912876
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22894800-22913000 Weak transcription Fetal Kidney kidney
2 chr10:22901600-22918200 Enhancers Primary T helper cells fromperipheralblood blood
3 chr10:22901800-22913000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr10:22901800-22918800 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr10:22902400-22921600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr10:22903800-22922000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr10:22904000-22913200 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr10:22905000-22914400 Enhancers Primary T helper cells PMA-I stimulated --
9 chr10:22905000-22918600 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr10:22905200-22919400 Enhancers NHDF-Ad bronchial
11 chr10:22905400-22913800 Enhancers Brain Anterior Caudate brain
12 chr10:22905400-22914400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr10:22905400-22915400 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr10:22906400-22918200 Enhancers NHLF lung
15 chr10:22906600-22913600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr10:22907600-22913000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr10:22907600-22922400 Weak transcription Placenta Amnion Placenta Amnion
18 chr10:22907800-22914400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr10:22907800-22919000 Weak transcription Duodenum Mucosa Duodenum
20 chr10:22908000-22913200 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr10:22908000-22914400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr10:22908200-22918000 Weak transcription Primary B cells from cord blood blood
23 chr10:22908600-22914600 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr10:22908800-22916200 Weak transcription Liver Liver
25 chr10:22908800-22918200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
26 chr10:22909000-22913600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr10:22909400-22913600 Enhancers Fetal Thymus thymus
28 chr10:22909600-22913400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr10:22909800-22917000 Enhancers HUVEC blood vessel
30 chr10:22909800-22917600 Weak transcription Thymus Thymus
31 chr10:22909800-22930400 Weak transcription Fetal Stomach stomach
32 chr10:22910000-22913000 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr10:22910000-22913200 Enhancers A549 lung
34 chr10:22910000-22913600 Weak transcription Stomach Smooth Muscle stomach
35 chr10:22910000-22914000 Enhancers Brain Inferior Temporal Lobe brain
36 chr10:22910000-22914800 Weak transcription Psoas Muscle Psoas
37 chr10:22910000-22916200 Weak transcription Stomach Mucosa stomach
38 chr10:22910000-22916400 Enhancers Brain Angular Gyrus brain
39 chr10:22910000-22918600 Enhancers Primary T regulatory cells fromperipheralblood blood
40 chr10:22910200-22913200 Weak transcription Rectal Smooth Muscle rectum
41 chr10:22910200-22913400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr10:22910200-22914400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr10:22910200-22914400 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr10:22910200-22914600 Weak transcription Right Ventricle heart
45 chr10:22910200-22915800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr10:22910200-22919000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr10:22910400-22914600 Weak transcription Fetal Heart heart
48 chr10:22910600-22914600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr10:22910600-22916400 Enhancers Brain Substantia Nigra brain
50 chr10:22910600-22917600 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015