The 2.0 version of rSNPBase

Variant report

Variant rs72836611
Chromosome Location chr6:11567958-11567959
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11556400-11568000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:11556800-11571600 Weak transcription Ovary ovary
3 chr6:11557000-11575600 Weak transcription Spleen Spleen
4 chr6:11557200-11575400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:11557400-11573200 Weak transcription Psoas Muscle Psoas
6 chr6:11563400-11575600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr6:11564200-11569200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr6:11564200-11573400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr6:11564600-11572800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr6:11565200-11568800 Weak transcription Colon Smooth Muscle Colon
11 chr6:11565200-11569600 Weak transcription Fetal Thymus thymus
12 chr6:11565200-11575400 Weak transcription Right Ventricle heart
13 chr6:11565800-11568200 Strong transcription Primary T cells from cord blood blood
14 chr6:11565800-11568200 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr6:11565800-11568600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:11565800-11568600 Strong transcription Cortex derived primary cultured neurospheres brain
17 chr6:11565800-11569800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:11565800-11575400 Weak transcription Duodenum Mucosa Duodenum
19 chr6:11566000-11568000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr6:11566000-11568600 Strong transcription Dnd41 blood
21 chr6:11566000-11569000 Weak transcription GM12878-XiMat blood
22 chr6:11566200-11568200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr6:11566400-11568000 Strong transcription Brain Cingulate Gyrus brain
24 chr6:11566600-11568200 Genic enhancers Primary monocytes fromperipheralblood blood
25 chr6:11566600-11568200 Strong transcription Fetal Muscle Leg muscle
26 chr6:11566600-11568200 Strong transcription Placenta Placenta
27 chr6:11566800-11568000 Strong transcription Liver Liver
28 chr6:11566800-11568000 Strong transcription Brain Angular Gyrus brain
29 chr6:11566800-11568200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr6:11567000-11579800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr6:11567200-11573000 Weak transcription Brain Germinal Matrix brain
32 chr6:11567400-11568000 Genic enhancers Primary neutrophils fromperipheralblood blood
33 chr6:11567400-11575400 Weak transcription A549 lung
34 chr6:11567600-11568200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:11567600-11568400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
36 chr6:11567600-11569400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr6:11567600-11569800 Weak transcription Fetal Muscle Trunk muscle
38 chr6:11567600-11570200 Weak transcription Aorta Aorta
39 chr6:11567600-11571000 Weak transcription Pancreas Pancrea
40 chr6:11567600-11571400 Weak transcription Gastric stomach
41 chr6:11567600-11575400 Weak transcription Primary hematopoietic stem cells blood
42 chr6:11567600-11575600 Weak transcription Brain Substantia Nigra brain
43 chr6:11567600-11575600 Weak transcription Left Ventricle heart
44 chr6:11567600-11575600 Weak transcription Stomach Smooth Muscle stomach
45 chr6:11567600-11575800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr6:11567600-11577400 Weak transcription Brain Inferior Temporal Lobe brain
47 chr6:11567600-11581400 Weak transcription Fetal Brain Female brain
48 chr6:11567600-11582600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr6:11567600-11586200 Weak transcription Fetal Intestine Small intestine
50 chr6:11567600-11586400 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015