Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:15839247..15841645-chr11:15844030..15847018,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11821667	1.00[EUR][1000 genomes]
rs11821691	1.00[EUR][1000 genomes]
rs6486264	1.00[EUR][1000 genomes]
rs6486265	1.00[EUR][1000 genomes]
rs67677040	1.00[EUR][1000 genomes]
rs7112764	1.00[EUR][1000 genomes]
rs7113024	1.00[EUR][1000 genomes]
rs72860688	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72860691	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72862120	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72862126	1.00[EUR][1000 genomes]
rs72862149	1.00[EUR][1000 genomes]
rs72862152	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72862154	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72862159	1.00[EUR][1000 genomes]
rs73428910	1.00[EUR][1000 genomes]
rs7945894	1.00[EUR][1000 genomes]
rs7946754	1.00[EUR][1000 genomes]
rs7947977	0.93[EUR][1000 genomes]
rs7948085	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051187	chr11:15781277-15846536	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv832073	chr11:15822409-15984078	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15829800-15848000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:15838800-15847000	Weak transcription	Pancreas	Pancrea
3	chr11:15838800-15848000	Weak transcription	Left Ventricle	heart
4	chr11:15839000-15845000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr11:15839400-15845000	Weak transcription	NH-A	brain
6	chr11:15839400-15850200	Weak transcription	Aorta	Aorta
7	chr11:15839800-15845600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr11:15839800-15845600	Weak transcription	Osteobl	bone
9	chr11:15839800-15847400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:15841600-15848600	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr11:15841800-15848600	Weak transcription	Right Atrium	heart
12	chr11:15841800-15849200	Weak transcription	Adipose Nuclei	Adipose
13	chr11:15841800-15849600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr11:15843200-15847000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr11:15843600-15844800	Weak transcription	Muscle Satellite Cultured Cells	--

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