Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:15853994..15856152-chr11:15858711..15860652,2	K562	blood:
2	chr11:15859929..15862630-chr11:15875446..15877131,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11821667	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11821691	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6486264	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6486265	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67677040	1.00[EUR][1000 genomes]
rs7112764	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7113024	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72860688	1.00[EUR][1000 genomes]
rs72860691	1.00[EUR][1000 genomes]
rs72862108	1.00[EUR][1000 genomes]
rs72862120	1.00[EUR][1000 genomes]
rs72862126	1.00[EUR][1000 genomes]
rs72862149	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72862152	1.00[EUR][1000 genomes]
rs72862154	1.00[EUR][1000 genomes]
rs73428910	1.00[EUR][1000 genomes]
rs7945894	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7946754	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7947977	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7948085	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832073	chr11:15822409-15984078	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15850600-15860600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr11:15853000-15866600	Weak transcription	Left Ventricle	heart
3	chr11:15854200-15866600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr11:15857200-15860400	Enhancers	Duodenum Mucosa	Duodenum
5	chr11:15857200-15860400	Enhancers	Fetal Intestine Small	intestine
6	chr11:15857800-15860600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr11:15858000-15860600	Enhancers	Rectal Mucosa Donor 31	rectum
8	chr11:15858000-15865000	Weak transcription	Fetal Muscle Trunk	muscle
9	chr11:15858400-15861400	Enhancers	Fetal Intestine Large	intestine
10	chr11:15858800-15865200	Weak transcription	Psoas Muscle	Psoas
11	chr11:15860000-15860600	Weak transcription	Fetal Muscle Leg	muscle
12	chr11:15860000-15861400	Enhancers	Small Intestine	intestine
13	chr11:15860000-15862000	Weak transcription	Sigmoid Colon	Sigmoid Colon

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