Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs17741785	1.00[ASN][1000 genomes]
rs2202658	1.00[ASN][1000 genomes]
rs2202663	1.00[ASN][1000 genomes]
rs45463891	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56159137	1.00[ASN][1000 genomes]
rs66511207	1.00[ASN][1000 genomes]
rs72901148	1.00[AFR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72902825	1.00[ASN][1000 genomes]
rs72902838	1.00[ASN][1000 genomes]
rs72902857	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72902878	1.00[ASN][1000 genomes]
rs72902895	1.00[ASN][1000 genomes]
rs72904839	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7454053	1.00[ASN][1000 genomes]
rs7738062	1.00[ASN][1000 genomes]
rs7751422	1.00[ASN][1000 genomes]
rs9443624	1.00[ASN][1000 genomes]
rs9443633	1.00[ASN][1000 genomes]
rs9443636	1.00[ASN][1000 genomes]
rs9448576	1.00[ASN][1000 genomes]
rs9448586	1.00[ASN][1000 genomes]
rs9448595	1.00[ASN][1000 genomes]
rs9448603	1.00[ASN][1000 genomes]
rs9688399	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015352	chr6:79521820-79757024	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	esv1839807	chr6:79532610-79606615	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:79550600-79554000	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr6:79550600-79554000	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr6:79551200-79554000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr6:79552200-79553600	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr6:79552200-79553800	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr6:79552600-79553200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
7	chr6:79552600-79553800	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr6:79552800-79553400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
9	chr6:79552800-79553600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:79552800-79553800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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