The 2.0 version of rSNPBase

Variant report

Variant rs72961704
Chromosome Location chr3:52943975-52943976
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52931600-52945000 Weak transcription Gastric stomach
2 chr3:52931800-52965400 Weak transcription Spleen Spleen
3 chr3:52932000-52946400 Weak transcription Esophagus oesophagus
4 chr3:52932000-52953400 Weak transcription Rectal Smooth Muscle rectum
5 chr3:52932000-52954000 Weak transcription Small Intestine intestine
6 chr3:52932000-52964000 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:52932000-52970000 Weak transcription H9 Cell Line embryonic stem cell
8 chr3:52932000-52978000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr3:52932200-52946000 Weak transcription Colon Smooth Muscle Colon
10 chr3:52932200-52948600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr3:52932200-52948800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr3:52932200-52951400 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr3:52932200-52952800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr3:52932200-52953600 Weak transcription Right Ventricle heart
15 chr3:52932200-52953800 Weak transcription Ovary ovary
16 chr3:52932200-52961400 Weak transcription HSMMtube muscle
17 chr3:52932200-52961800 Weak transcription A549 lung
18 chr3:52932200-52963000 Weak transcription Stomach Mucosa stomach
19 chr3:52932200-52966400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr3:52932200-52967800 Weak transcription HSMM muscle
21 chr3:52932200-52968600 Weak transcription Osteobl bone
22 chr3:52932200-52968800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr3:52932200-52968800 Weak transcription Fetal Brain Male brain
24 chr3:52932400-52945000 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr3:52932400-52946400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr3:52932400-52946400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr3:52932400-52946600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr3:52932400-52947000 Weak transcription Fetal Heart heart
29 chr3:52932400-52948200 Weak transcription Primary monocytes fromperipheralblood blood
30 chr3:52932400-52953000 Weak transcription Brain Angular Gyrus brain
31 chr3:52932400-52953400 Weak transcription Fetal Kidney kidney
32 chr3:52932400-52968600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr3:52932400-52968600 Weak transcription NHDF-Ad bronchial
34 chr3:52932400-52968800 Weak transcription NHEK skin
35 chr3:52935600-52968600 Strong transcription Dnd41 blood
36 chr3:52936600-52947000 Weak transcription Fetal Brain Female brain
37 chr3:52937200-52959800 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr3:52938000-52959000 Strong transcription Primary B cells from peripheral blood blood
39 chr3:52938400-52946400 Weak transcription Fetal Lung lung
40 chr3:52939400-52946400 Weak transcription Fetal Muscle Trunk muscle
41 chr3:52939400-52946400 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr3:52939400-52947000 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr3:52939400-52947000 Weak transcription HepG2 liver
44 chr3:52939400-52953000 Weak transcription Aorta Aorta
45 chr3:52939600-52953400 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr3:52939600-52961200 Weak transcription Primary hematopoietic stem cells blood
47 chr3:52940000-52947400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr3:52940200-52949000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr3:52940200-52953400 Weak transcription H1 Cell Line embryonic stem cell
50 chr3:52940600-52946400 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015