Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs2010140	1.00[AFR][1000 genomes]
rs72996777	1.00[AFR][1000 genomes]
rs72998751	1.00[AFR][1000 genomes]
rs72998759	1.00[AFR][1000 genomes]
rs72998765	1.00[AFR][1000 genomes]
rs72998771	1.00[AFR][1000 genomes]
rs72998773	1.00[AFR][1000 genomes]
rs72998780	1.00[AFR][1000 genomes]
rs72998783	1.00[AFR][1000 genomes]
rs72998789	1.00[AFR][1000 genomes]
rs73000660	1.00[AFR][1000 genomes]
rs73000662	1.00[AFR][1000 genomes]
rs73000681	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73000682	1.00[AFR][1000 genomes]
rs73000683	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73000688	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73000691	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73000695	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73002606	1.00[AFR][1000 genomes]
rs73002610	1.00[AFR][1000 genomes]
rs73002677	1.00[AFR][1000 genomes]
rs73002679	1.00[AFR][1000 genomes]
rs73002681	1.00[AFR][1000 genomes]
rs73002683	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040650	chr11:108859584-109174553	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv898390	chr11:108893765-109003536	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:108977600-108983600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr11:108977800-108982600	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr11:108977800-108982600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr11:108977800-108982800	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr11:108977800-108982800	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr11:108977800-108983000	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr11:108977800-108983000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr11:108977800-108983000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr11:108977800-108983800	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr11:108979000-108979800	Enhancers	Fetal Heart	heart

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