Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156017399..156019270-chr3:156022267..156024641,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12163648	0.92[ASN][1000 genomes]
rs13321669	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16825979	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16825997	0.92[ASN][1000 genomes]
rs28623610	0.93[EUR][1000 genomes]
rs6441055	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6441056	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6441057	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6441058	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6773597	0.92[ASN][1000 genomes]
rs73014142	0.92[ASN][1000 genomes]
rs73876148	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7616667	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7625905	0.92[ASN][1000 genomes]
rs7626513	0.92[ASN][1000 genomes]
rs7639374	0.92[ASN][1000 genomes]
rs7641812	0.92[ASN][1000 genomes]
rs924352	0.92[ASN][1000 genomes]
rs9289963	0.81[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs9289964	0.92[ASN][1000 genomes]
rs9812993	0.92[ASN][1000 genomes]
rs9844584	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9848813	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9858999	0.92[ASN][1000 genomes]
rs9866817	0.92[ASN][1000 genomes]
rs9872906	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014755	chr3:155889430-156411894	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156010000-156024000	Weak transcription	Aorta	Aorta
2	chr3:156010000-156025400	Weak transcription	Pancreas	Pancrea
3	chr3:156013400-156019000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr3:156015400-156018400	Enhancers	Fetal Brain Male	brain
5	chr3:156015800-156021600	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr3:156016200-156019800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr3:156016200-156020600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr3:156016800-156018000	Enhancers	Fetal Muscle Leg	muscle
9	chr3:156016800-156018400	Enhancers	Brain Anterior Caudate	brain
10	chr3:156016800-156018400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
11	chr3:156016800-156019400	Enhancers	Brain Hippocampus Middle	brain
12	chr3:156016800-156019600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
13	chr3:156017000-156018400	Enhancers	Brain Angular Gyrus	brain
14	chr3:156017200-156018200	Enhancers	Skeletal Muscle Male	skeletal muscle
15	chr3:156017200-156019000	Enhancers	Adipose Nuclei	Adipose
16	chr3:156017200-156020800	Weak transcription	Left Ventricle	heart
17	chr3:156017400-156018000	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr3:156017400-156020800	Weak transcription	Brain Substantia Nigra	brain
19	chr3:156017800-156018600	Enhancers	Fetal Brain Female	brain
20	chr3:156017800-156020800	Weak transcription	Brain Cingulate Gyrus	brain

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