Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11927460	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16834133	0.87[EUR][1000 genomes]
rs16847297	0.83[EUR][1000 genomes]
rs1858240	0.83[EUR][1000 genomes]
rs4333097	0.85[EUR][1000 genomes]
rs4856664	0.87[EUR][1000 genomes]
rs57468658	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57628918	0.92[EUR][1000 genomes]
rs58618482	0.83[EUR][1000 genomes]
rs59539229	0.87[EUR][1000 genomes]
rs60022403	0.83[EUR][1000 genomes]
rs60886133	0.83[EUR][1000 genomes]
rs6779506	0.87[EUR][1000 genomes]
rs73014613	0.83[EUR][1000 genomes]
rs73014673	0.83[EUR][1000 genomes]
rs73030455	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73030460	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73030496	0.87[EUR][1000 genomes]
rs73032205	0.87[EUR][1000 genomes]
rs7625559	0.83[EUR][1000 genomes]
rs7628078	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533237	chr3:161019834-161804660	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	91 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:161679000-161680600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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