Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11927460	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs16834133	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16847297	0.95[EUR][1000 genomes]
rs1858240	0.95[EUR][1000 genomes]
rs41497744	0.80[EUR][1000 genomes]
rs4333097	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4856664	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4856745	0.90[EUR][1000 genomes]
rs56340997	0.80[EUR][1000 genomes]
rs57468658	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57628918	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs58618482	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs59539229	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59872885	0.88[EUR][1000 genomes]
rs60022403	0.95[EUR][1000 genomes]
rs60886133	0.95[EUR][1000 genomes]
rs6779506	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73014613	0.95[EUR][1000 genomes]
rs73014673	0.95[EUR][1000 genomes]
rs73018723	0.80[EUR][1000 genomes]
rs73018726	0.80[EUR][1000 genomes]
rs73030447	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73030460	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73030496	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73032205	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7625559	0.95[EUR][1000 genomes]
rs7628078	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533237	chr3:161019834-161804660	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	91 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:161693200-161695400	Enhancers	Muscle Satellite Cultured Cells	--
2	chr3:161693200-161696800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr3:161693400-161693800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr3:161693600-161694600	Weak transcription	Osteobl	bone

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