Variant report

Variant	rs73063864
Chromosome Location	chr3:34989962-34989963
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11925888	0.97[ASN][1000 genomes]
rs12053892	0.86[ASN][1000 genomes]
rs12632359	0.95[ASN][1000 genomes]
rs1474299	0.87[ASN][1000 genomes]
rs17032385	0.84[ASN][1000 genomes]
rs4575830	0.87[ASN][1000 genomes]
rs4678717	0.81[ASN][1000 genomes]
rs4678724	0.87[ASN][1000 genomes]
rs56235912	0.85[ASN][1000 genomes]
rs62260224	0.87[ASN][1000 genomes]
rs73061969	0.84[ASN][1000 genomes]
rs73063843	0.91[ASN][1000 genomes]
rs7650825	0.92[ASN][1000 genomes]
rs7653203	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876686	chr3:34967346-35075355	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34988400-34990200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr3:34988600-34990200	Enhancers	Fetal Heart	heart
3	chr3:34988600-34991200	Enhancers	NH-A	brain
4	chr3:34988800-34990200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr3:34989000-34990000	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr3:34989000-34990000	Weak transcription	Fetal Muscle Leg	muscle
7	chr3:34989000-34990400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr3:34989000-34990600	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr3:34989200-34990200	Enhancers	Adipose Nuclei	Adipose
10	chr3:34989400-34990000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr3:34989600-34990000	Enhancers	Brain Hippocampus Middle	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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