Variant report

Variant	rs17032385
Chromosome Location	chr3:34922723-34922724
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:34918996..34921030-chr3:34921442..34924051,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11925888	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12053892	0.80[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12632359	0.81[ASN][1000 genomes]
rs1357428	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1474299	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17032340	0.90[ASN][1000 genomes]
rs2071488	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4549234	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4575830	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4678716	0.85[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4678717	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4678724	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56235912	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58778451	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59750319	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62260224	0.89[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs6550306	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6792813	0.90[ASN][1000 genomes]
rs73061969	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73063843	0.93[ASN][1000 genomes]
rs73063864	0.84[ASN][1000 genomes]
rs7625986	0.82[ASN][1000 genomes]
rs7653203	0.86[ASN][1000 genomes]
rs940047	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv590052	chr3:34910172-34937547	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34922600-34923200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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