Variant report
Variant | rs73079459 |
---|---|
Chromosome Location | chr2:213306279-213306280 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10168850 | 0.83[ASN][1000 genomes] |
rs10178687 | 0.83[ASN][1000 genomes] |
rs10180614 | 0.83[ASN][1000 genomes] |
rs10194811 | 0.83[ASN][1000 genomes] |
rs11675580 | 0.83[ASN][1000 genomes] |
rs13015808 | 0.87[ASN][1000 genomes] |
rs13389790 | 0.95[ASN][1000 genomes] |
rs13430619 | 0.95[ASN][1000 genomes] |
rs1354617 | 1.00[ASN][1000 genomes] |
rs1384290 | 0.83[ASN][1000 genomes] |
rs1384291 | 0.83[ASN][1000 genomes] |
rs1505372 | 0.88[ASN][1000 genomes] |
rs16848553 | 0.81[ASN][1000 genomes] |
rs16848556 | 0.91[ASN][1000 genomes] |
rs16848564 | 0.91[ASN][1000 genomes] |
rs16848571 | 0.91[ASN][1000 genomes] |
rs16848593 | 0.95[ASN][1000 genomes] |
rs16848675 | 0.97[EUR][1000 genomes] |
rs17259208 | 0.95[ASN][1000 genomes] |
rs17325821 | 0.87[ASN][1000 genomes] |
rs2062930 | 1.00[ASN][1000 genomes] |
rs2101152 | 0.95[ASN][1000 genomes] |
rs2220024 | 0.95[ASN][1000 genomes] |
rs55992489 | 1.00[ASN][1000 genomes] |
rs6752299 | 0.97[EUR][1000 genomes] |
rs73063184 | 0.97[EUR][1000 genomes] |
rs73067074 | 0.94[EUR][1000 genomes] |
rs73079470 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7575120 | 0.95[ASN][1000 genomes] |
rs9283525 | 0.83[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv834527 | chr2:213115966-213334308 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionmiRNA | 2 gene(s) | inside rSNPs | diseases |
2 | nsv1004573 | chr2:213186537-213365252 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionmiRNA | 2 gene(s) | inside rSNPs | diseases |
3 | nsv875811 | chr2:213200920-213347104 | Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionmiRNA | 2 gene(s) | inside rSNPs | diseases |
4 | esv34076 | chr2:213298576-213306627 | Weak transcription Enhancers | TF binding region | 1 gene(s) | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:213302000-213306600 | Weak transcription | Aorta | Aorta |