The 2.0 version of rSNPBase

Variant report

Variant rs73088936
Chromosome Location chr1:227624046-227624047
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227616600-227625200 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr1:227617400-227625200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:227617600-227624400 Weak transcription Fetal Lung lung
4 chr1:227617600-227625200 Weak transcription Primary hematopoietic stem cells blood
5 chr1:227617600-227625200 Weak transcription Fetal Intestine Small intestine
6 chr1:227617600-227631200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:227617800-227625200 Weak transcription Fetal Kidney kidney
8 chr1:227617800-227625200 Weak transcription Psoas Muscle Psoas
9 chr1:227617800-227625200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:227617800-227625200 Weak transcription Rectal Smooth Muscle rectum
11 chr1:227618000-227624600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:227618000-227625200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:227618600-227625200 Weak transcription Left Ventricle heart
14 chr1:227619600-227625200 Weak transcription Right Ventricle heart
15 chr1:227619600-227625400 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr1:227619600-227628800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:227619800-227624400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr1:227619800-227625200 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr1:227619800-227625200 Enhancers Brain Hippocampus Middle brain
20 chr1:227619800-227625200 Weak transcription Colon Smooth Muscle Colon
21 chr1:227619800-227625200 Weak transcription Ovary ovary
22 chr1:227619800-227625400 Weak transcription HSMMtube muscle
23 chr1:227620000-227624400 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr1:227620000-227624800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:227620000-227625200 Weak transcription Fetal Intestine Large intestine
26 chr1:227620000-227625200 Weak transcription Right Atrium heart
27 chr1:227620200-227625200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:227620400-227625200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:227620400-227625200 Weak transcription NHLF lung
30 chr1:227620600-227624400 Weak transcription A549 lung
31 chr1:227620600-227624600 Weak transcription HUVEC blood vessel
32 chr1:227620600-227625200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:227621400-227625600 Enhancers Fetal Brain Male brain
34 chr1:227621800-227624600 Enhancers Brain Inferior Temporal Lobe brain
35 chr1:227622800-227624600 Enhancers Skeletal Muscle Male skeletal muscle
36 chr1:227622800-227625200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr1:227623200-227624800 Weak transcription Fetal Muscle Leg muscle
38 chr1:227623200-227625200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:227623200-227625200 Weak transcription Stomach Mucosa stomach
40 chr1:227623400-227624800 Weak transcription K562 blood
41 chr1:227623800-227624200 Enhancers Adipose Nuclei Adipose
42 chr1:227623800-227625200 Enhancers Brain Anterior Caudate brain
43 chr1:227623800-227625200 Enhancers Brain Cingulate Gyrus brain
44 chr1:227623800-227625200 Enhancers Brain Substantia Nigra brain
45 chr1:227624000-227624200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
46 chr1:227624000-227624800 Enhancers Brain Angular Gyrus brain

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Last update: Aug 31, 2015