Variant report
| Variant | rs73090995 |
|---|---|
| Chromosome Location | chr1:227760669-227760670 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:227752000-227766800 | Weak transcription | Ovary | ovary |
| 2 | chr1:227752200-227763200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 3 | chr1:227752200-227774400 | Weak transcription | Aorta | Aorta |
| 4 | chr1:227752400-227763000 | Weak transcription | Stomach Mucosa | stomach |
| 5 | chr1:227752400-227763800 | Weak transcription | HSMMtube | muscle |
| 6 | chr1:227752400-227766800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 7 | chr1:227752400-227780600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 8 | chr1:227753600-227763000 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 9 | chr1:227754400-227783600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 10 | chr1:227756800-227762400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 11 | chr1:227758400-227761400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 12 | chr1:227759400-227761000 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
| 13 | chr1:227759800-227760800 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr1:227759800-227760800 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 15 | chr1:227759800-227760800 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
| 16 | chr1:227759800-227760800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 17 | chr1:227759800-227760800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 18 | chr1:227759800-227760800 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
| 19 | chr1:227759800-227760800 | ZNF genes & repeats | Rectal Mucosa Donor 31 | rectum |
| 20 | chr1:227759800-227760800 | Genic enhancers | K562 | blood |
| 21 | chr1:227759800-227761000 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 22 | chr1:227759800-227761000 | ZNF genes & repeats | Brain Germinal Matrix | brain |
| 23 | chr1:227759800-227761800 | ZNF genes & repeats | Primary B cells from cord blood | blood |
| 24 | chr1:227760000-227760800 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
| 25 | chr1:227760000-227760800 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 26 | chr1:227760000-227760800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
| 27 | chr1:227760000-227760800 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 28 | chr1:227760000-227760800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 29 | chr1:227760000-227760800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 30 | chr1:227760000-227760800 | ZNF genes & repeats | Esophagus | oesophagus |
| 31 | chr1:227760000-227760800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 32 | chr1:227760000-227760800 | ZNF genes & repeats | Fetal Stomach | stomach |
| 33 | chr1:227760000-227760800 | ZNF genes & repeats | Gastric | stomach |
| 34 | chr1:227760000-227760800 | Enhancers | Right Ventricle | heart |
| 35 | chr1:227760000-227760800 | ZNF genes & repeats | Spleen | Spleen |
| 36 | chr1:227760000-227760800 | ZNF genes & repeats | NHEK | skin |
| 37 | chr1:227760000-227761000 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 38 | chr1:227760200-227760800 | ZNF genes & repeats | Lung | lung |
| 39 | chr1:227760200-227760800 | Enhancers | Psoas Muscle | Psoas |
| 40 | chr1:227760200-227761000 | Weak transcription | Adipose Nuclei | Adipose |
| 41 | chr1:227760200-227761000 | Enhancers | Fetal Heart | heart |
| 42 | chr1:227760200-227761000 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 43 | chr1:227760200-227773600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 44 | chr1:227760200-227783800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 45 | chr1:227760200-227784600 | Weak transcription | Fetal Kidney | kidney |
| 46 | chr1:227760400-227760800 | Weak transcription | Primary T cells from cord blood | blood |
| 47 | chr1:227760400-227765400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr1:227760400-227767000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 49 | chr1:227760600-227760800 | ZNF genes & repeats | Fetal Intestine Large | intestine |
| 50 | chr1:227760600-227760800 | Flanking Active TSS | Left Ventricle | heart |
