Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1352726	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1388135	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1388136	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1490836	0.89[ASN][1000 genomes]
rs17351329	0.88[ASN][1000 genomes]
rs4588579	0.87[EUR][1000 genomes]
rs4957712	0.90[EUR][1000 genomes]
rs4957713	0.90[EUR][1000 genomes]
rs4957714	0.90[EUR][1000 genomes]
rs59961335	0.89[ASN][1000 genomes]
rs62357891	0.83[ASN][1000 genomes]
rs62357932	0.89[ASN][1000 genomes]
rs62357937	0.89[ASN][1000 genomes]
rs62357940	0.81[ASN][1000 genomes]
rs6887589	0.83[ASN][1000 genomes]
rs723798	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73200681	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73200683	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73202711	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7444469	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7704700	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34018	chr5:106720912-107110506	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:107024400-107032200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:107029200-107032000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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