The 2.0 version of rSNPBase

Variant report

Variant rs7320595
Chromosome Location chr13:49855276-49855277
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49823800-49855400 Weak transcription Small Intestine intestine
2 chr13:49826600-49877800 Weak transcription Psoas Muscle Psoas
3 chr13:49832800-49860600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr13:49832800-49862800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr13:49833000-49865600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr13:49833200-49863800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr13:49833200-49866600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr13:49834200-49855600 Weak transcription Fetal Intestine Small intestine
9 chr13:49834200-49875200 Weak transcription Gastric stomach
10 chr13:49834600-49867000 Weak transcription Thymus Thymus
11 chr13:49834800-49873000 Weak transcription HMEC breast
12 chr13:49834800-49875400 Weak transcription Esophagus oesophagus
13 chr13:49835400-49862200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr13:49835600-49866800 Weak transcription Brain Angular Gyrus brain
15 chr13:49835600-49866800 Weak transcription Brain Germinal Matrix brain
16 chr13:49835600-49867000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr13:49835600-49867000 Weak transcription Fetal Brain Male brain
18 chr13:49835800-49863600 Weak transcription Right Ventricle heart
19 chr13:49835800-49875200 Weak transcription Primary B cells from peripheral blood blood
20 chr13:49835800-49875200 Weak transcription GM12878-XiMat blood
21 chr13:49836000-49866800 Weak transcription Colon Smooth Muscle Colon
22 chr13:49836200-49856600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr13:49836200-49866800 Weak transcription Brain Substantia Nigra brain
24 chr13:49836600-49866800 Weak transcription Brain Anterior Caudate brain
25 chr13:49836600-49867000 Weak transcription Primary B cells from cord blood blood
26 chr13:49836600-49867000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr13:49837600-49858800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr13:49837800-49866600 Weak transcription Fetal Lung lung
29 chr13:49838600-49875400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr13:49842600-49866800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr13:49842600-49874600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr13:49842800-49855400 Weak transcription Fetal Muscle Trunk muscle
33 chr13:49842800-49855600 Weak transcription Fetal Stomach stomach
34 chr13:49842800-49866800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr13:49842800-49869400 Weak transcription Lung lung
36 chr13:49842800-49875200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr13:49846800-49855400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr13:49846800-49866800 Weak transcription Brain Cingulate Gyrus brain
41 chr13:49848000-49862200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr13:49848000-49873800 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr13:49852400-49855800 Weak transcription Placenta Amnion Placenta Amnion
44 chr13:49852400-49857000 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr13:49852800-49855800 Strong transcription Stomach Smooth Muscle stomach
46 chr13:49852800-49857400 Strong transcription Primary monocytes fromperipheralblood blood
47 chr13:49853000-49857200 Strong transcription Primary T cells fromperipheralblood blood
48 chr13:49853000-49865000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr13:49853200-49857800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr13:49853200-49867000 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015