The 2.0 version of rSNPBase

Variant report

Variant rs9526535
Chromosome Location chr13:49864556-49864557
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49826600-49877800 Weak transcription Psoas Muscle Psoas
2 chr13:49833000-49865600 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr13:49833200-49866600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr13:49834200-49875200 Weak transcription Gastric stomach
5 chr13:49834600-49867000 Weak transcription Thymus Thymus
6 chr13:49834800-49873000 Weak transcription HMEC breast
7 chr13:49834800-49875400 Weak transcription Esophagus oesophagus
8 chr13:49835600-49866800 Weak transcription Brain Angular Gyrus brain
9 chr13:49835600-49866800 Weak transcription Brain Germinal Matrix brain
10 chr13:49835600-49867000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr13:49835600-49867000 Weak transcription Fetal Brain Male brain
12 chr13:49835800-49875200 Weak transcription Primary B cells from peripheral blood blood
13 chr13:49835800-49875200 Weak transcription GM12878-XiMat blood
14 chr13:49836000-49866800 Weak transcription Colon Smooth Muscle Colon
15 chr13:49836200-49866800 Weak transcription Brain Substantia Nigra brain
16 chr13:49836600-49866800 Weak transcription Brain Anterior Caudate brain
17 chr13:49836600-49867000 Weak transcription Primary B cells from cord blood blood
18 chr13:49836600-49867000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr13:49837800-49866600 Weak transcription Fetal Lung lung
20 chr13:49838600-49875400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr13:49842600-49866800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr13:49842600-49874600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr13:49842800-49866800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr13:49842800-49869400 Weak transcription Lung lung
25 chr13:49842800-49875200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr13:49846800-49866800 Weak transcription Brain Cingulate Gyrus brain
29 chr13:49848000-49873800 Strong transcription Primary neutrophils fromperipheralblood blood
30 chr13:49853000-49865000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr13:49853200-49867000 Weak transcription Fetal Thymus thymus
32 chr13:49853400-49866800 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr13:49853800-49866800 Weak transcription Adipose Nuclei Adipose
34 chr13:49853800-49867000 Weak transcription Brain Hippocampus Middle brain
35 chr13:49853800-49875400 Weak transcription Primary T cells from cord blood blood
36 chr13:49853800-49875400 Weak transcription Fetal Intestine Large intestine
37 chr13:49854000-49866800 Weak transcription Ovary ovary
38 chr13:49854000-49871400 Weak transcription Spleen Spleen
39 chr13:49854000-49875000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr13:49854000-49875200 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr13:49854000-49875200 Weak transcription Duodenum Mucosa Duodenum
42 chr13:49854000-49877600 Weak transcription Left Ventricle heart
43 chr13:49854000-49883000 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr13:49854200-49866400 Weak transcription Rectal Smooth Muscle rectum
45 chr13:49855000-49875200 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr13:49856200-49866400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr13:49857000-49866800 Weak transcription Fetal Intestine Small intestine
48 chr13:49857000-49866800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr13:49857200-49865600 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr13:49857200-49866800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015