The 2.0 version of rSNPBase

Variant report

Variant rs9316437
Chromosome Location chr13:49860691-49860692
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49826600-49877800 Weak transcription Psoas Muscle Psoas
2 chr13:49832800-49862800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr13:49833000-49865600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr13:49833200-49863800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr13:49833200-49866600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr13:49834200-49875200 Weak transcription Gastric stomach
7 chr13:49834600-49867000 Weak transcription Thymus Thymus
8 chr13:49834800-49873000 Weak transcription HMEC breast
9 chr13:49834800-49875400 Weak transcription Esophagus oesophagus
10 chr13:49835400-49862200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr13:49835600-49866800 Weak transcription Brain Angular Gyrus brain
12 chr13:49835600-49866800 Weak transcription Brain Germinal Matrix brain
13 chr13:49835600-49867000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr13:49835600-49867000 Weak transcription Fetal Brain Male brain
15 chr13:49835800-49863600 Weak transcription Right Ventricle heart
16 chr13:49835800-49875200 Weak transcription Primary B cells from peripheral blood blood
17 chr13:49835800-49875200 Weak transcription GM12878-XiMat blood
18 chr13:49836000-49866800 Weak transcription Colon Smooth Muscle Colon
19 chr13:49836200-49866800 Weak transcription Brain Substantia Nigra brain
20 chr13:49836600-49866800 Weak transcription Brain Anterior Caudate brain
21 chr13:49836600-49867000 Weak transcription Primary B cells from cord blood blood
22 chr13:49836600-49867000 Weak transcription Brain Inferior Temporal Lobe brain
23 chr13:49837800-49866600 Weak transcription Fetal Lung lung
24 chr13:49838600-49875400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr13:49842600-49866800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr13:49842600-49874600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr13:49842800-49866800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr13:49842800-49869400 Weak transcription Lung lung
29 chr13:49842800-49875200 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr13:49842800-49875400 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr13:49846800-49866800 Weak transcription Brain Cingulate Gyrus brain
33 chr13:49848000-49862200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr13:49848000-49873800 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr13:49853000-49865000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr13:49853200-49867000 Weak transcription Fetal Thymus thymus
37 chr13:49853400-49866800 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr13:49853800-49866800 Weak transcription Adipose Nuclei Adipose
39 chr13:49853800-49867000 Weak transcription Brain Hippocampus Middle brain
40 chr13:49853800-49875400 Weak transcription Primary T cells from cord blood blood
41 chr13:49853800-49875400 Weak transcription Fetal Intestine Large intestine
42 chr13:49854000-49863600 Weak transcription Aorta Aorta
43 chr13:49854000-49866800 Weak transcription Ovary ovary
44 chr13:49854000-49871400 Weak transcription Spleen Spleen
45 chr13:49854000-49875000 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr13:49854000-49875200 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr13:49854000-49875200 Weak transcription Duodenum Mucosa Duodenum
48 chr13:49854000-49877600 Weak transcription Left Ventricle heart
49 chr13:49854000-49883000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr13:49854200-49866400 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015