The 2.0 version of rSNPBase

Variant report

Variant rs7984689
Chromosome Location chr13:49826508-49826509
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49823000-49826600 Enhancers Primary T killer memory cells from peripheral blood blood
2 chr13:49823000-49827800 Weak transcription Aorta Aorta
3 chr13:49823000-49828000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr13:49823000-49829200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr13:49823000-49829200 Weak transcription HSMMtube muscle
6 chr13:49823000-49833600 Weak transcription Esophagus oesophagus
7 chr13:49823000-49833600 Weak transcription Lung lung
8 chr13:49823000-49833600 Weak transcription Placenta Amnion Placenta Amnion
9 chr13:49823000-49833800 Weak transcription Brain Cingulate Gyrus brain
10 chr13:49823000-49833800 Weak transcription Fetal Brain Male brain
11 chr13:49823000-49836400 Weak transcription Colonic Mucosa Colon
12 chr13:49823000-49837000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr13:49823000-49838000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr13:49823000-49838200 Weak transcription H9 Cell Line embryonic stem cell
15 chr13:49823000-49844200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr13:49823200-49827600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr13:49823200-49827600 Weak transcription HSMM muscle
18 chr13:49823200-49827800 Weak transcription Fetal Lung lung
19 chr13:49823200-49827800 Weak transcription HUVEC blood vessel
20 chr13:49823200-49828000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr13:49823200-49828000 Weak transcription Ovary ovary
22 chr13:49823200-49828600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr13:49823200-49828600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr13:49823200-49828800 Weak transcription NH-A brain
25 chr13:49823200-49829000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr13:49823200-49829000 Weak transcription Primary B cells from peripheral blood blood
27 chr13:49823200-49829000 Weak transcription Fetal Thymus thymus
28 chr13:49823200-49829000 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr13:49823200-49829200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr13:49823200-49829200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr13:49823200-49830000 Weak transcription Brain Germinal Matrix brain
32 chr13:49823200-49830200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr13:49823200-49832200 Weak transcription Thymus Thymus
34 chr13:49823200-49833600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr13:49823200-49833600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr13:49823200-49833600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr13:49823200-49833600 Weak transcription Fetal Kidney kidney
38 chr13:49823200-49833600 Weak transcription Placenta Placenta
39 chr13:49823400-49827600 Weak transcription Primary T cells from cord blood blood
40 chr13:49823400-49827800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr13:49823400-49828200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr13:49823400-49828200 Weak transcription Brain Substantia Nigra brain
43 chr13:49823400-49828400 Weak transcription Fetal Stomach stomach
44 chr13:49823400-49828800 Weak transcription Muscle Satellite Cultured Cells --
45 chr13:49823400-49829000 Weak transcription Brain Inferior Temporal Lobe brain
46 chr13:49823400-49829000 Weak transcription NHDF-Ad bronchial
47 chr13:49823400-49830200 Weak transcription HMEC breast
48 chr13:49823400-49831800 Weak transcription Fetal Brain Female brain
49 chr13:49823400-49833600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr13:49823400-49835000 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015