The 2.0 version of rSNPBase

Variant report

Variant rs9316434
Chromosome Location chr13:49824356-49824357
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49822600-49824800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr13:49822600-49826200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr13:49823000-49824800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr13:49823000-49826200 Weak transcription Gastric stomach
5 chr13:49823000-49826200 Weak transcription Pancreas Pancrea
6 chr13:49823000-49826200 Weak transcription Psoas Muscle Psoas
7 chr13:49823000-49826200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr13:49823000-49826200 Weak transcription Spleen Spleen
9 chr13:49823000-49826600 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr13:49823000-49827800 Weak transcription Aorta Aorta
11 chr13:49823000-49828000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr13:49823000-49829200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr13:49823000-49829200 Weak transcription HSMMtube muscle
14 chr13:49823000-49833600 Weak transcription Esophagus oesophagus
15 chr13:49823000-49833600 Weak transcription Lung lung
16 chr13:49823000-49833600 Weak transcription Placenta Amnion Placenta Amnion
17 chr13:49823000-49833800 Weak transcription Brain Cingulate Gyrus brain
18 chr13:49823000-49833800 Weak transcription Fetal Brain Male brain
19 chr13:49823000-49836400 Weak transcription Colonic Mucosa Colon
20 chr13:49823000-49837000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr13:49823000-49838000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr13:49823000-49838200 Weak transcription H9 Cell Line embryonic stem cell
23 chr13:49823000-49844200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr13:49823200-49824400 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr13:49823200-49824600 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr13:49823200-49824600 Enhancers Liver Liver
27 chr13:49823200-49824600 Enhancers Duodenum Smooth Muscle Duodenum
28 chr13:49823200-49825200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr13:49823200-49825200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr13:49823200-49825800 Weak transcription Primary monocytes fromperipheralblood blood
31 chr13:49823200-49826200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr13:49823200-49826200 Weak transcription Fetal Intestine Small intestine
33 chr13:49823200-49826200 Weak transcription Left Ventricle heart
34 chr13:49823200-49826200 Weak transcription Right Atrium heart
35 chr13:49823200-49826200 Weak transcription Right Ventricle heart
36 chr13:49823200-49826400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr13:49823200-49827600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr13:49823200-49827600 Weak transcription HSMM muscle
39 chr13:49823200-49827800 Weak transcription Fetal Lung lung
40 chr13:49823200-49827800 Weak transcription HUVEC blood vessel
41 chr13:49823200-49828000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr13:49823200-49828000 Weak transcription Ovary ovary
43 chr13:49823200-49828600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr13:49823200-49828600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr13:49823200-49828800 Weak transcription NH-A brain
46 chr13:49823200-49829000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr13:49823200-49829000 Weak transcription Primary B cells from peripheral blood blood
48 chr13:49823200-49829000 Weak transcription Fetal Thymus thymus
49 chr13:49823200-49829000 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr13:49823200-49829200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015