Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:124282474..124284467-chr7:124298276..124301225,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs4404861	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4728004	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4731195	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4731196	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55654546	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55765047	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56781370	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59386025	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60017067	0.89[ASN][1000 genomes]
rs60034049	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61380107	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62478267	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62478269	0.84[EUR][1000 genomes]
rs62478327	0.81[EUR][1000 genomes]
rs62478334	0.90[ASN][1000 genomes]
rs62478335	0.91[ASN][1000 genomes]
rs62478337	0.89[ASN][1000 genomes]
rs62478338	0.87[ASN][1000 genomes]
rs6466942	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6966034	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7804776	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9641743	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429809	chr7:123937674-124835925	Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
2	nsv831118	chr7:124172267-124347527	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv3443061	chr7:124298941-124301389	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:124299200-124302600	Weak transcription	Brain Hippocampus Middle	brain

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