Variant report
Variant | rs7804776 |
---|---|
Chromosome Location | chr7:124315213-124315214 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs4404861 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4728004 | 0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4731195 | 0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs4731196 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55654546 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs55765047 | 0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs56781370 | 0.87[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs59386025 | 0.90[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs60017067 | 0.83[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs60034049 | 0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs61380107 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs62478267 | 0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs62478269 | 0.88[EUR][1000 genomes] |
rs62478327 | 0.85[EUR][1000 genomes] |
rs62478334 | 0.82[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs62478335 | 0.82[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs62478337 | 0.83[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs62478338 | 0.83[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs6466942 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6966034 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs73221445 | 0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs9641743 | 1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv429809 | chr7:123937674-124835925 | Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 49 gene(s) | inside rSNPs | diseases |
2 | nsv831118 | chr7:124172267-124347527 | Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
3 | nsv1027091 | chr7:124311742-124388908 | Flanking Active TSS Enhancers Weak transcription Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:124315000-124315400 | Enhancers | Fetal Lung | lung |