Variant report

Variant	rs73242979
Chromosome Location	chr8:66776820-66776821
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11993474	1.00[EUR][1000 genomes]
rs11994363	1.00[EUR][1000 genomes]
rs11994410	1.00[EUR][1000 genomes]
rs57871763	1.00[EUR][1000 genomes]
rs58020170	1.00[EUR][1000 genomes]
rs73242968	1.00[EUR][1000 genomes]
rs73242971	1.00[EUR][1000 genomes]
rs73242973	1.00[EUR][1000 genomes]
rs73242975	1.00[EUR][1000 genomes]
rs73242981	1.00[EUR][1000 genomes]
rs73242982	1.00[EUR][1000 genomes]
rs73242984	1.00[EUR][1000 genomes]
rs73242992	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73244804	1.00[EUR][1000 genomes]
rs73244816	1.00[AMR][1000 genomes]
rs73244820	1.00[AMR][1000 genomes]
rs73244823	1.00[AMR][1000 genomes]
rs73244824	1.00[AMR][1000 genomes]
rs73244826	1.00[AMR][1000 genomes]
rs73244833	1.00[AMR][1000 genomes]
rs73247075	1.00[AMR][1000 genomes]
rs73247076	1.00[AMR][1000 genomes]
rs73247084	1.00[AMR][1000 genomes]
rs73248904	1.00[AMR][1000 genomes]
rs73248977	1.00[AMR][1000 genomes]
rs7842488	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv1023239	chr8:66775321-66904124	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3440026	chr8:66775357-66777018	Weak transcription Active TSS Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv3390496	chr8:66775633-66782628	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66774400-66779400	Weak transcription	Thymus	Thymus
2	chr8:66776800-66777000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:66776800-66777000	Flanking Active TSS	HepG2	liver
4	chr8:66776800-66777000	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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