Variant report

Variant	rs7325768
Chromosome Location	chr13:92998075-92998076
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr13:92957176..92958871-chr13:92997001..92998891,2	K562	blood:
2	chr13:92968259..92969910-chr13:92996026..92998901,2	K562	blood:
3	chr13:92995861..92998163-chr13:93022468..93024947,2	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10162003	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11616708	0.80[EUR][1000 genomes]
rs1887157	0.84[ASN][1000 genomes]
rs1926632	0.85[ASN][1000 genomes]
rs1926633	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1926635	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1926637	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1926638	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1926639	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1926640	0.85[ASN][1000 genomes]
rs2148522	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2182535	0.85[ASN][1000 genomes]
rs4085673	0.84[ASN][1000 genomes]
rs4338645	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4505184	0.85[EUR][1000 genomes]
rs4771856	0.85[ASN][1000 genomes]
rs4771857	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6492598	0.82[EUR][1000 genomes]
rs6492603	0.85[ASN][1000 genomes]
rs6492604	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs716623	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs716624	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7323550	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7330825	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7331847	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7332756	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7490525	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7981777	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7985663	0.90[EUR][1000 genomes]
rs7994032	0.82[EUR][1000 genomes]
rs7996497	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7997136	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9284271	0.82[EUR][1000 genomes]
rs9301792	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9523630	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9589506	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9589512	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2753357	chr13:92903199-93026399	Enhancers ZNF genes & repeats Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1036835	chr13:92953101-93039812	Enhancers ZNF genes & repeats Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1050788	chr13:92953101-93045491	Enhancers Active TSS Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1051394	chr13:92959102-93049128	Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv1037815	chr13:92959102-93052008	Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv456068	chr13:92961151-93038913	Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv562727	chr13:92961151-93038913	Weak transcription Enhancers Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:92994400-92998200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr13:92997800-92998800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr13:92997800-92998800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr13:92998000-92998400	Enhancers	Adipose Nuclei	Adipose

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