Variant report

Variant	rs7326329
Chromosome Location	chr13:97860907-97860908
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10161888	0.87[EUR][1000 genomes]
rs16953867	1.00[CEU][hapmap]
rs16953933	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3904139	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56331763	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs59939527	0.93[EUR][1000 genomes]
rs7317617	0.87[EUR][1000 genomes]
rs7327054	0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7332122	0.87[EUR][1000 genomes]
rs7332935	1.00[EUR][1000 genomes]
rs7334833	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs7335512	0.84[EUR][1000 genomes]
rs73553593	0.90[EUR][1000 genomes]
rs73555705	0.97[EUR][1000 genomes]
rs74107562	0.93[EUR][1000 genomes]
rs7983752	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7984448	0.87[EUR][1000 genomes]
rs7988970	0.87[EUR][1000 genomes]
rs9582110	1.00[CEU][hapmap]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97853400-97861600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr13:97857000-97861000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr13:97858400-97862600	Weak transcription	Brain Anterior Caudate	brain
4	chr13:97858600-97861600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr13:97858600-97862400	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr13:97858600-97863000	Weak transcription	HSMM	muscle
7	chr13:97858600-97864000	Weak transcription	HepG2	liver
8	chr13:97858600-97867200	Weak transcription	Hela-S3	cervix
9	chr13:97858800-97861800	Weak transcription	Brain Substantia Nigra	brain
10	chr13:97859000-97861000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr13:97859000-97863000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr13:97859000-97863400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr13:97859200-97863600	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr13:97859400-97863000	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr13:97859400-97864400	Weak transcription	Stomach Mucosa	stomach
16	chr13:97859800-97863600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr13:97860400-97864200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr13:97860400-97864200	Weak transcription	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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