Variant report

Variant	rs7334833
Chromosome Location	chr13:97835987-97835988
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10161888	0.90[EUR][1000 genomes]
rs16953867	1.00[CEU][hapmap]
rs16953933	0.90[EUR][1000 genomes]
rs3904139	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs56331763	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59939527	0.97[EUR][1000 genomes]
rs7317617	0.90[EUR][1000 genomes]
rs7326329	0.90[EUR][1000 genomes]
rs7326670	0.81[EUR][1000 genomes]
rs7327054	0.90[EUR][1000 genomes]
rs7329164	0.81[EUR][1000 genomes]
rs7332122	0.90[EUR][1000 genomes]
rs7332935	0.90[EUR][1000 genomes]
rs7335512	0.87[EUR][1000 genomes]
rs7339217	0.81[EUR][1000 genomes]
rs73553593	0.93[EUR][1000 genomes]
rs73555705	0.93[EUR][1000 genomes]
rs74107562	0.97[EUR][1000 genomes]
rs7983752	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7984448	0.90[EUR][1000 genomes]
rs7988970	0.90[EUR][1000 genomes]
rs9284175	0.84[EUR][1000 genomes]
rs947452	0.81[EUR][1000 genomes]
rs9582110	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs9584506	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1137	chr13:97803474-97848814	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97830200-97843400	Weak transcription	Spleen	Spleen
2	chr13:97832600-97837800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr13:97832800-97840400	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr13:97835200-97836400	Weak transcription	Primary hematopoietic stem cells	blood
5	chr13:97835600-97836200	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr13:97835800-97836000	Enhancers	Placenta	Placenta
7	chr13:97835800-97837200	Enhancers	Ovary	ovary

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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