Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10091284	1.00[ASN][1000 genomes]
rs10091347	0.81[ASN][1000 genomes]
rs11985132	1.00[EUR][1000 genomes]
rs11997644	0.81[ASN][1000 genomes]
rs16919116	0.90[ASN][1000 genomes]
rs16935168	0.81[ASN][1000 genomes]
rs16935176	0.81[ASN][1000 genomes]
rs16935210	0.81[ASN][1000 genomes]
rs4474011	0.81[ASN][1000 genomes]
rs55711798	0.81[ASN][1000 genomes]
rs56118521	0.81[ASN][1000 genomes]
rs57592190	0.81[ASN][1000 genomes]
rs60141621	0.90[ASN][1000 genomes]
rs6472427	0.81[ASN][1000 genomes]
rs73273753	0.86[AMR][1000 genomes]
rs73273758	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73277058	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73683748	0.81[ASN][1000 genomes]
rs73683749	0.81[ASN][1000 genomes]
rs73683764	0.83[ASN][1000 genomes]
rs7460149	0.83[ASN][1000 genomes]
rs7464267	0.81[ASN][1000 genomes]
rs7825981	0.81[ASN][1000 genomes]
rs7831860	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033122	chr8:69728620-69843088	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1031633	chr8:69766575-70322790	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69808000-69833000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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