Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10483898	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17107424	0.87[ASN][1000 genomes]
rs17107444	0.87[ASN][1000 genomes]
rs57985933	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58024876	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59146318	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59588653	1.00[ASN][1000 genomes]
rs60262994	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61199699	0.87[ASN][1000 genomes]
rs61265887	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61572411	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs732176	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73308938	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73308941	1.00[ASN][1000 genomes]
rs73308947	0.87[ASN][1000 genomes]
rs73308971	0.87[ASN][1000 genomes]
rs73308985	0.87[ASN][1000 genomes]
rs73309000	0.87[ASN][1000 genomes]
rs73310817	0.87[ASN][1000 genomes]
rs73310826	0.87[ASN][1000 genomes]
rs73319533	0.87[ASN][1000 genomes]
rs73319535	0.87[ASN][1000 genomes]
rs73319540	0.87[ASN][1000 genomes]
rs74064052	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832837	chr14:78766805-78946526	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78809800-78811200	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr14:78810200-78812000	Enhancers	Fetal Brain Female	brain
3	chr14:78810200-78813800	Enhancers	Brain Germinal Matrix	brain
4	chr14:78810400-78811600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:78810400-78814400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr14:78810600-78811600	Enhancers	Fetal Brain Male	brain
7	chr14:78810800-78813000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr14:78810800-78814400	Enhancers	Fetal Intestine Small	intestine

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