Variant report

Variant	rs73308941
Chromosome Location	chr14:78813408-78813409
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10483898	1.00[ASN][1000 genomes]
rs17107424	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17107444	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55806332	1.00[AMR][1000 genomes]
rs55842090	1.00[EUR][1000 genomes]
rs56019115	1.00[EUR][1000 genomes]
rs56193432	1.00[AMR][1000 genomes]
rs56772228	1.00[AMR][1000 genomes]
rs57985933	1.00[ASN][1000 genomes]
rs58024876	1.00[ASN][1000 genomes]
rs58493810	1.00[EUR][1000 genomes]
rs59146318	1.00[ASN][1000 genomes]
rs59588653	1.00[ASN][1000 genomes]
rs60262994	1.00[ASN][1000 genomes]
rs61199699	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61265887	1.00[ASN][1000 genomes]
rs61467094	1.00[EUR][1000 genomes]
rs61572411	1.00[ASN][1000 genomes]
rs732176	1.00[ASN][1000 genomes]
rs73308933	1.00[ASN][1000 genomes]
rs73308938	1.00[ASN][1000 genomes]
rs73308947	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73308971	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73308985	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73309000	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73310817	0.87[ASN][1000 genomes]
rs73310826	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73319533	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs73319535	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs73319540	1.00[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs74064035	1.00[EUR][1000 genomes]
rs74064052	1.00[ASN][1000 genomes]
rs74065971	1.00[AMR][1000 genomes]
rs74065972	1.00[AMR][1000 genomes]
rs74065973	1.00[AMR][1000 genomes]
rs74065975	1.00[AMR][1000 genomes]
rs74065977	1.00[AMR][1000 genomes]
rs74065980	1.00[AMR][1000 genomes]
rs74065985	1.00[AMR][1000 genomes]
rs9323662	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832837	chr14:78766805-78946526	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78810200-78813800	Enhancers	Brain Germinal Matrix	brain
2	chr14:78810400-78814400	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr14:78810800-78814400	Enhancers	Fetal Intestine Small	intestine
4	chr14:78813200-78813800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr14:78813200-78814200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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