Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:94487137..94489802-chr10:94495790..94498552,2	K562	blood:
2	chr10:94448217..94451174-chr10:94487394..94489032,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000152804	Chromatin interaction

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11813799	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11815736	1.00[EUR][1000 genomes]
rs11817277	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11819282	1.00[EUR][1000 genomes]
rs1578672	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1889894	1.00[EUR][1000 genomes]
rs28590736	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55770900	1.00[EUR][1000 genomes]
rs56057066	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56143704	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56310806	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57298326	1.00[EUR][1000 genomes]
rs58619531	1.00[EUR][1000 genomes]
rs59489651	1.00[EUR][1000 genomes]
rs61274524	1.00[EUR][1000 genomes]
rs61451715	1.00[EUR][1000 genomes]
rs6583818	1.00[EUR][1000 genomes]
rs7067733	1.00[EUR][1000 genomes]
rs7069538	1.00[EUR][1000 genomes]
rs7073957	1.00[EUR][1000 genomes]
rs7082686	1.00[EUR][1000 genomes]
rs7087423	1.00[EUR][1000 genomes]
rs7098638	1.00[EUR][1000 genomes]
rs7100035	1.00[EUR][1000 genomes]
rs7100357	1.00[EUR][1000 genomes]
rs73311745	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73311753	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74149127	1.00[EUR][1000 genomes]
rs7898027	1.00[EUR][1000 genomes]
rs7910569	1.00[EUR][1000 genomes]
rs7913315	1.00[EUR][1000 genomes]
rs7915349	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94481200-94488200	Weak transcription	Primary B cells from peripheral blood	blood
2	chr10:94486000-94488800	Weak transcription	Primary B cells from cord blood	blood
3	chr10:94486400-94487600	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr10:94486600-94487600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:94486600-94487800	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:94486800-94487600	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr10:94486800-94488000	Enhancers	K562	blood
8	chr10:94487200-94487800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
9	chr10:94487200-94488000	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr10:94487200-94488000	Enhancers	Hela-S3	cervix
11	chr10:94487200-94488400	Enhancers	HepG2	liver
12	chr10:94487400-94491000	Weak transcription	Pancreas	Pancrea

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