Variant report

Variant	rs73331032
Chromosome Location	chr8:121349894-121349895
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16893921	0.95[AFR][1000 genomes]
rs16893924	1.00[AFR][1000 genomes]
rs16893958	0.91[AFR][1000 genomes]
rs60062153	0.88[AFR][1000 genomes]
rs73315116	0.88[AFR][1000 genomes]
rs73315127	0.88[AFR][1000 genomes]
rs73315145	0.88[AFR][1000 genomes]
rs73315155	0.80[AFR][1000 genomes]
rs73315158	0.80[AFR][1000 genomes]
rs73315178	0.88[AFR][1000 genomes]
rs73315186	0.88[AFR][1000 genomes]
rs73315188	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891420	chr8:121194900-121561369	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv612112	chr8:121234298-121385167	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv891421	chr8:121292407-121653902	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121320400-121372600	Weak transcription	Fetal Intestine Small	intestine
2	chr8:121333800-121383800	Weak transcription	Fetal Intestine Large	intestine
3	chr8:121344200-121361400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
4	chr8:121346400-121377600	Weak transcription	Colon Smooth Muscle	Colon
5	chr8:121346600-121355400	Weak transcription	Gastric	stomach
6	chr8:121347400-121358800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr8:121348000-121351400	Weak transcription	Fetal Lung	lung
8	chr8:121348200-121352400	Weak transcription	Ovary	ovary
9	chr8:121348200-121356200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr8:121348200-121356200	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr8:121348200-121357600	Weak transcription	Fetal Muscle Trunk	muscle
12	chr8:121348200-121359200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr8:121348600-121359600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr8:121348800-121352600	Weak transcription	HSMMtube	muscle
15	chr8:121348800-121354000	Weak transcription	HSMM	muscle
16	chr8:121348800-121355000	Weak transcription	Rectal Smooth Muscle	rectum
17	chr8:121348800-121359000	Weak transcription	Fetal Brain Male	brain
18	chr8:121349000-121352400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr8:121349000-121354000	Weak transcription	Aorta	Aorta
20	chr8:121349000-121355400	Weak transcription	Fetal Muscle Leg	muscle
21	chr8:121349200-121350000	Weak transcription	Placenta	Placenta
22	chr8:121349200-121351000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr8:121349200-121352200	Weak transcription	NHDF-Ad	bronchial
24	chr8:121349200-121352400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr8:121349200-121353400	Weak transcription	Fetal Stomach	stomach
26	chr8:121349200-121356400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr8:121349200-121357600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr8:121349800-121350400	Enhancers	Fetal Kidney	kidney

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