Variant report

Variant	rs73362012
Chromosome Location	chr7:70869186-70869187
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:70856131..70858873-chr7:70867703..70870975,3	K562	blood:

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs10262784	1.00[ASN][1000 genomes]
rs10274606	1.00[ASN][1000 genomes]
rs11972101	0.86[AFR][1000 genomes]
rs11974045	1.00[ASN][1000 genomes]
rs11979445	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11979470	0.97[AFR][1000 genomes]
rs11981404	0.86[AFR][1000 genomes]
rs11981510	0.86[AFR][1000 genomes]
rs11981801	0.97[AFR][1000 genomes]
rs11981830	0.92[AFR][1000 genomes]
rs11984058	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28595875	1.00[ASN][1000 genomes]
rs2906274	1.00[ASN][1000 genomes]
rs4425646	0.90[AFR][1000 genomes]
rs4595007	1.00[ASN][1000 genomes]
rs57162295	1.00[ASN][1000 genomes]
rs58023981	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60739260	0.82[AFR][1000 genomes]
rs61737661	0.85[AFR][1000 genomes]
rs6961004	1.00[ASN][1000 genomes]
rs73360197	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73360199	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73362010	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73362011	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73362014	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73362015	0.98[AFR][1000 genomes]
rs73362022	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73362023	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73362026	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73362084	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73362085	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73362092	0.85[AFR][1000 genomes]
rs73362094	0.85[AFR][1000 genomes]
rs73362101	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73363706	1.00[ASN][1000 genomes]
rs73363709	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73363712	0.86[AFR][1000 genomes]
rs73363713	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73363716	0.85[AFR][1000 genomes]
rs73363721	0.86[AFR][1000 genomes]
rs73363724	0.86[AFR][1000 genomes]
rs73363728	0.86[AFR][1000 genomes]
rs73363730	0.86[AFR][1000 genomes]
rs73363732	0.92[AFR][1000 genomes]
rs73363734	0.86[AFR][1000 genomes]
rs73363739	0.84[AFR][1000 genomes]
rs73363743	0.92[AFR][1000 genomes]
rs73363744	0.86[AFR][1000 genomes]
rs73363746	0.86[AFR][1000 genomes]
rs73363747	0.86[AFR][1000 genomes]
rs73363749	0.92[AFR][1000 genomes]
rs73363751	0.86[AFR][1000 genomes]
rs73363755	0.86[AFR][1000 genomes]
rs73363757	0.86[AFR][1000 genomes]
rs73363773	0.92[AFR][1000 genomes]
rs7808680	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70853400-70885800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:70860800-70869600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr7:70864600-70870400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:70867600-70881000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr7:70867800-70871400	Enhancers	Fetal Lung	lung
6	chr7:70868000-70869800	Weak transcription	Right Ventricle	heart
7	chr7:70868200-70869200	Enhancers	Ovary	ovary
8	chr7:70868200-70869600	Enhancers	Fetal Brain Male	brain
9	chr7:70868200-70881800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr7:70868200-70892400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr7:70868400-70870200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
12	chr7:70868400-70870400	Enhancers	Fetal Muscle Leg	muscle
13	chr7:70868600-70869200	Strong transcription	HUES64 Cell Line	embryonic stem cell
14	chr7:70868600-70869200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
15	chr7:70868600-70869200	Active TSS	Aorta	Aorta
16	chr7:70868600-70869600	Weak transcription	Left Ventricle	heart
17	chr7:70868800-70869200	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr7:70868800-70869600	Weak transcription	H9 Cell Line	embryonic stem cell
19	chr7:70868800-70870000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr7:70868800-70872200	Weak transcription	Fetal Muscle Trunk	muscle
21	chr7:70868800-70882200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
22	chr7:70869000-70869200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr7:70869000-70871600	Enhancers	Fetal Heart	heart
24	chr7:70869000-70873200	Weak transcription	Fetal Brain Female	brain
25	chr7:70869000-70875400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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