Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:24112639..24114521-chr6:24119805..24122141,2	MCF-7	breast:
2	chr6:24119759..24121969-chr6:24123709..24126349,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs16889030	1.00[EUR][1000 genomes]
rs4506039	1.00[EUR][1000 genomes]
rs59280764	1.00[EUR][1000 genomes]
rs60503247	1.00[EUR][1000 genomes]
rs61300914	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62400306	0.91[AFR][1000 genomes]
rs6906832	1.00[EUR][1000 genomes]
rs6907894	1.00[EUR][1000 genomes]
rs6932594	1.00[EUR][1000 genomes]
rs73385614	1.00[EUR][1000 genomes]
rs73385618	1.00[EUR][1000 genomes]
rs73389743	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73389776	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73391951	1.00[EUR][1000 genomes]
rs73391956	1.00[EUR][1000 genomes]
rs73391963	1.00[EUR][1000 genomes]
rs73391967	1.00[EUR][1000 genomes]
rs73394004	1.00[EUR][1000 genomes]
rs73394046	1.00[EUR][1000 genomes]
rs73394053	1.00[EUR][1000 genomes]
rs73394070	1.00[EUR][1000 genomes]
rs73394072	1.00[EUR][1000 genomes]
rs73394100	1.00[EUR][1000 genomes]
rs73396004	1.00[EUR][1000 genomes]
rs73396022	1.00[EUR][1000 genomes]
rs73396024	1.00[EUR][1000 genomes]
rs7745031	1.00[EUR][1000 genomes]
rs807711	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029930	chr6:23481989-24289948	Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24101000-24126200	Weak transcription	Pancreas	Pancrea
2	chr6:24118000-24122200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr6:24118000-24126000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr6:24119600-24121800	Weak transcription	Fetal Brain Female	brain
5	chr6:24119800-24126000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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