Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs16889030	1.00[EUR][1000 genomes]
rs4506039	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59280764	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60503247	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61300914	1.00[EUR][1000 genomes]
rs6906832	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6907894	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6932594	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73389743	1.00[EUR][1000 genomes]
rs73389773	1.00[EUR][1000 genomes]
rs73389776	1.00[EUR][1000 genomes]
rs73391951	1.00[EUR][1000 genomes]
rs73391956	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73391963	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73391967	1.00[EUR][1000 genomes]
rs73394004	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73394046	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73394053	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73394070	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73394100	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73396004	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73396022	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73396024	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7745031	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs807711	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029930	chr6:23481989-24289948	Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv427746	chr6:24221299-24305709	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24263000-24283000	Weak transcription	Fetal Intestine Large	intestine
2	chr6:24263400-24273800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:24270000-24271000	Enhancers	Fetal Kidney	kidney
4	chr6:24270000-24271200	Enhancers	Fetal Intestine Small	intestine
5	chr6:24270200-24270400	Enhancers	Pancreas	Pancrea
6	chr6:24270200-24271800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:24270200-24274800	Strong transcription	HepG2	liver

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