Variant report

Variant	rs73431981
Chromosome Location	chr7:120008261-120008262
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs58182881	0.85[AFR][1000 genomes]
rs60202137	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73427928	0.84[AFR][1000 genomes]
rs73427955	0.88[AFR][1000 genomes]
rs73429988	0.92[AFR][1000 genomes]
rs73429998	0.92[AFR][1000 genomes]
rs73431924	0.92[AFR][1000 genomes]
rs73431934	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431939	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431940	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431941	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431945	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431949	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431961	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431967	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431976	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431995	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431997	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73433810	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73433856	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73433871	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435806	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435860	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435864	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435871	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435874	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435889	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73435902	0.89[AFR][1000 genomes]
rs73437811	0.89[AFR][1000 genomes]
rs73437840	0.82[AFR][1000 genomes]
rs73437862	0.82[AFR][1000 genomes]
rs73437865	0.82[AFR][1000 genomes]
rs73437874	0.82[AFR][1000 genomes]
rs73437881	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024920	chr7:120002420-120083753	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119996800-120009800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:120008000-120009000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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